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36 Open 72 Closed
36 Open 72 Closed
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Issues list

Add trusted publishing enhancement New feature or request
#150 opened Oct 25, 2024 by flying-sheep
1 of 3 tasks
1
Discrete values after using the CLR normalization pt.pp.clr
#144 opened Jun 27, 2024 by LucHendriks
WNN integration raise error while adding connectivities into mdata.obsp bug Something isn't working
#142 opened May 28, 2024 by 5tinzi
Invalid function call in independent component analysis (tl.ica) bug Something isn't working
#139 opened Apr 12, 2024 by pavanvidem
Test against pre-releases enhancement New feature or request
#138 opened Apr 9, 2024 by ivirshup v0.1.7
Improve module import time enhancement New feature or request
#137 opened Mar 29, 2024 by rpadmanabhan v0.1.7
1
Add fragment file path to a merged mudata object enhancement New feature or request
#133 opened Mar 8, 2024 by jolvhull v0.1.7
1
dsb normalization results do not replicate results with the original DSBNormalizeProtein function in R bug Something isn't working
#131 opened Mar 1, 2024 by javier-marchena-hurtado
float overflow in dsb normalization bug Something isn't working
#130 opened Mar 1, 2024 by javier-marchena-hurtado
1
ValueError: could not broadcast input array from shape bug Something isn't working question Further information is requested
#128 opened Nov 27, 2023 by wariobrega
3
Sum duplicate rows in muon.atac.tl.count_fragments_features enhancement New feature or request
#125 opened Aug 31, 2023 by benjamin-james
Enable gene_symbols argument in mu.pl.embedding enhancement New feature or request
#124 opened Aug 30, 2023 by racng
1
Batch correction for joint modality umap enhancement New feature or request
#123 opened Aug 23, 2023 by GirayEryilmaz
MOFA error when data has been created using axis=-1
#122 opened Aug 23, 2023 by dawe
4
"OptionError: 'Pattern matched multiple keys'" traceback in tutorial bug Something isn't working
#119 opened Aug 4, 2023 by chris-rands
OSError: Unable to synchronously create attribute (object header message is too large)
#118 opened Aug 4, 2023 by zhouzhendiao
1
Negative values after pt.pp.dsb bug Something isn't working
#116 opened Jul 28, 2023 by ChaseTaylor939
1
MOFA on multiple groups with single view enhancement New feature or request
#113 opened Jun 25, 2023 by martinrohbeck
1
Count fragment function counts duplicates bug Something isn't working
#110 opened Jun 12, 2023 by lauradmartens v0.2.0
Adopt cookiecutter-scverse template enhancement New feature or request
#103 opened Apr 28, 2023 by grst v0.2.0
Make code that retrieves values from obs/X/layer/raw of the different modalities a public function enhancement New feature or request
#98 opened Mar 29, 2023 by grst
Broken link: tutorial for cell type annotation bug Something isn't working
#97 opened Mar 15, 2023 by yangjun9095
atac.pp.scopen fails while allocating a second array after computing scopen but before writing result to disk bug Something isn't working
#92 opened Feb 3, 2023 by alexlenail
4
Any plan to add footprints module for ATAC-seq? enhancement New feature or request
#90 opened Jan 28, 2023 by lzj1769
1
Clearer documentation for ac.tl.lsi enhancement New feature or request
#87 opened Jan 9, 2023 by alexlenail v0.1.7
1
ProTip! Exclude everything labeled bug with -label:bug.