Skip to content

Commit

Permalink
nextflow 1 and dockstore.yml
Browse files Browse the repository at this point in the history
  • Loading branch information
shaze committed Oct 30, 2022
1 parent 1ea963e commit 7ea932f
Show file tree
Hide file tree
Showing 4 changed files with 29 additions and 1 deletion.
26 changes: 26 additions & 0 deletions .dockstore.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,26 @@
version: 1.0
workflows:
- subclass: NFL
primaryDescriptorPath: /strepA.nf
name: strepA-nf
authors:
- name: Scott Hazelhurst
email: [email protected]
orcid: 0000-0002-0581-149X
publish: True
- subclass: NFL
primaryDescriptorPath: /strepB.nf
name: strepA-nf
authors:
- name: Scott Hazelhurst
email: [email protected]
orcid: 0000-0002-0581-149X
publish: True
- subclass: NFL
primaryDescriptorPath: /spn.nf
name: strepA-nf
authors:
- name: Scott Hazelhurst
email: [email protected]
orcid: 0000-0002-0581-149X
publish: True
1 change: 1 addition & 0 deletions spn.nf
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,7 @@
// Scott Hazelhurst
// MIT License as specified in https://github.com/shaze/GS/blob/master/LICENSE.md

nextflow.enable.dsl=1
params.max_forks=10
max_forks = params.max_forks

Expand Down
1 change: 1 addition & 0 deletions strepA.nf
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,7 @@
// Scott Hazelhurst
// MIT License as specified in https://github.com/shaze/GS/blob/master/LICENSE.md

nextflow.enable.dsl=1
params.max_forks=10
max_forks = params.max_forks

Expand Down
2 changes: 1 addition & 1 deletion strepB.nf
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@
// Scott Hazelhurst
// MIT License as specified in https://github.com/shaze/GS/blob/master/LICENSE.md


nextflow.enable.dsl=1
if (params.batch_dir == "0") {
println "No input batch directory was given"
System.exit(12);
Expand Down

0 comments on commit 7ea932f

Please sign in to comment.