mrna

mcmc version of the mrna model in https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5081097/

How to run the analysis

To run the analysis, run the command make analysis from the project root. This will install a fresh virtual environment if one doesn't exist already, activate it and install python dependencies and cmdstan, then run the analysis with the following commands:

• python prepare_data.py
• python sample.py
• jupyter execute investigate.ipynb