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1. COMBINE-lab/cuttlefish COMBINE-lab/cuttlefish Public

   Building the compacted de Bruijn graph efficiently from references or reads.

   C++ 86 11

2. COMBINE-lab/kmers COMBINE-lab/kmers Public

   A bit-packed k-mer representation (and relevant utilities) for rust

   Rust 48 9

3. COMBINE-lab/pufferfish2 COMBINE-lab/pufferfish2 Public

   Rust 15 1

4. COMBINE-lab/seine-rs COMBINE-lab/seine-rs Public

   A (rust)🦀 library and suite of tools for manipulating and processing the output of salmon, alevin, and alevin-fry 🐟

   Rust 7 2

5. lrgr/EMF lrgr/EMF Public

   Jupyter Notebook 2

6. COMBINE-lab/perplexity COMBINE-lab/perplexity Public

   Rust 5 2