Skip to content
@vivarium-collective

Vivarium Collective

home of the vivarium core engine and project ecosystem

Pinned Loading

  1. vivarium-core vivarium-core Public

    Core Interface and Engine for Vivarium

    Python 26 3

  2. bigraph-schema bigraph-schema Public

    compositional type schemas

    Python 1 2

  3. process-bigraph process-bigraph Public

    Jupyter Notebook 2 2

  4. bigraph-viz bigraph-viz Public

    visualization tool for bigraph schema

    Jupyter Notebook

Repositories

Showing 10 of 42 repositories
  • vivarium-collective.github.io Public
    vivarium-collective/vivarium-collective.github.io’s past year of commit activity
    HTML 0 0 1 0 Updated Nov 28, 2024
  • multicell-schema Public
    vivarium-collective/multicell-schema’s past year of commit activity
    Python 0 0 0 0 Updated Nov 28, 2024
  • process-bigraph Public
    vivarium-collective/process-bigraph’s past year of commit activity
    Jupyter Notebook 2 Apache-2.0 2 30 0 Updated Nov 26, 2024
  • bigraph-schema Public

    compositional type schemas

    vivarium-collective/bigraph-schema’s past year of commit activity
    Python 1 Apache-2.0 2 33 0 Updated Nov 22, 2024
  • spatio-flux Public

    spatio-temporal fba for process-bigraphs

    vivarium-collective/spatio-flux’s past year of commit activity
    Python 1 1 2 1 Updated Nov 8, 2024
  • vivarium-simservice Public
    vivarium-collective/vivarium-simservice’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 1, 2024
  • compucell-tissueforge Public

    Process-Bigraph composition of CompuCell3D and TissueForge

    vivarium-collective/compucell-tissueforge’s past year of commit activity
    Python 0 1 0 0 Updated Nov 1, 2024
  • bigraph-viz Public

    visualization tool for bigraph schema

    vivarium-collective/bigraph-viz’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Oct 24, 2024
  • bio-bundles Public

    Commonly grouped biological composites

    vivarium-collective/bio-bundles’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 16, 2024
  • biosimulator-processes Public

    Core implementations of simulator processes using the process-bigraph Process API

    vivarium-collective/biosimulator-processes’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 1 0 1 Updated Oct 2, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…