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import all four brances of the sequence ontology
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Adam Coffman
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Aug 5, 2016
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,39 +1,150 @@ | ||
| <?xml version="1.0" encoding="UTF-8"?> | ||
| <java version="1.6.0_65" class="java.beans.XMLDecoder"> | ||
| <object class="org.obo.filters.ObjectFilterImpl"> | ||
| <void property="aspect"> | ||
| <object class="org.obo.filters.AncestorSearchAspect"/> | ||
| <object class="org.obo.filters.CompoundFilterImpl"> | ||
| <void property="booleanOperation"> | ||
| <int>1</int> | ||
| </void> | ||
| <void property="comparison"> | ||
| <object class="org.obo.filters.EqualsComparison"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object class="org.obo.filters.IDSearchCriterion"/> | ||
| </void> | ||
| <void property="reasoner"> | ||
| <object class="org.obo.reasoner.rbr.RuleBasedReasoner"> | ||
| <void property="properties"> | ||
| <object class="java.util.HashSet"/> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void property="traversalFilter"> | ||
| <object class="org.obo.filters.LinkFilterImpl"> | ||
| <void property="filter"> | ||
| <void property="filters"> | ||
| <void method="add"> | ||
| <object class="org.obo.filters.ObjectFilterImpl"> | ||
| <void property="aspect"> | ||
| <object id="AncestorSearchAspect0" class="org.obo.filters.AncestorSearchAspect"/> | ||
| </void> | ||
| <void property="comparison"> | ||
| <object class="org.obo.filters.EqualsComparison"/> | ||
| <object id="EqualsComparison0" class="org.obo.filters.EqualsComparison"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object class="org.obo.filters.IDSearchCriterion"/> | ||
| <object id="IDSearchCriterion0" class="org.obo.filters.IDSearchCriterion"/> | ||
| </void> | ||
| <void property="reasoner"> | ||
| <object id="RuleBasedReasoner0" class="org.obo.reasoner.rbr.RuleBasedReasoner"> | ||
| <void property="properties"> | ||
| <object class="java.util.HashSet"/> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void property="traversalFilter"> | ||
| <object class="org.obo.filters.LinkFilterImpl"> | ||
| <void property="filter"> | ||
| <void property="comparison"> | ||
| <object class="org.obo.filters.EqualsComparison"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object class="org.obo.filters.IDSearchCriterion"/> | ||
| </void> | ||
| <void property="value"> | ||
| <string>OBO_REL:is_a</string> | ||
| </void> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void property="value"> | ||
| <string>OBO_REL:is_a</string> | ||
| <string>SO:0001060</string> | ||
| </void> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void property="value"> | ||
| <string>SO:0001060</string> | ||
| </object> | ||
| </void> | ||
| <void method="add"> | ||
| <object class="org.obo.filters.ObjectFilterImpl"> | ||
| <void property="aspect"> | ||
| <object idref="AncestorSearchAspect0"/> | ||
| </void> | ||
| <void property="comparison"> | ||
| <object idref="EqualsComparison0"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object idref="IDSearchCriterion0"/> | ||
| </void> | ||
| <void property="reasoner"> | ||
| <object idref="RuleBasedReasoner0"/> | ||
| </void> | ||
| <void property="traversalFilter"> | ||
| <object class="org.obo.filters.LinkFilterImpl"> | ||
| <void property="filter"> | ||
| <void property="comparison"> | ||
| <object class="org.obo.filters.EqualsComparison"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object class="org.obo.filters.IDSearchCriterion"/> | ||
| </void> | ||
| <void property="value"> | ||
| <string>OBO_REL:is_a</string> | ||
| </void> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void property="value"> | ||
| <string>SO:0000400</string> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void method="add"> | ||
| <object class="org.obo.filters.ObjectFilterImpl"> | ||
| <void property="aspect"> | ||
| <object idref="AncestorSearchAspect0"/> | ||
| </void> | ||
| <void property="comparison"> | ||
| <object idref="EqualsComparison0"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object idref="IDSearchCriterion0"/> | ||
| </void> | ||
| <void property="reasoner"> | ||
| <object idref="RuleBasedReasoner0"/> | ||
| </void> | ||
| <void property="traversalFilter"> | ||
| <object class="org.obo.filters.LinkFilterImpl"> | ||
| <void property="filter"> | ||
| <void property="comparison"> | ||
| <object class="org.obo.filters.EqualsComparison"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object class="org.obo.filters.IDSearchCriterion"/> | ||
| </void> | ||
| <void property="value"> | ||
| <string>OBO_REL:is_a</string> | ||
| </void> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void property="value"> | ||
| <string>SO:0001260</string> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void method="add"> | ||
| <object class="org.obo.filters.ObjectFilterImpl"> | ||
| <void property="aspect"> | ||
| <object idref="AncestorSearchAspect0"/> | ||
| </void> | ||
| <void property="comparison"> | ||
| <object idref="EqualsComparison0"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object idref="IDSearchCriterion0"/> | ||
| </void> | ||
| <void property="reasoner"> | ||
| <object idref="RuleBasedReasoner0"/> | ||
| </void> | ||
| <void property="traversalFilter"> | ||
| <object class="org.obo.filters.LinkFilterImpl"> | ||
| <void property="filter"> | ||
| <void property="comparison"> | ||
| <object class="org.obo.filters.EqualsComparison"/> | ||
| </void> | ||
| <void property="criterion"> | ||
| <object class="org.obo.filters.IDSearchCriterion"/> | ||
| </void> | ||
| <void property="value"> | ||
| <string>OBO_REL:is_a</string> | ||
| </void> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| <void property="value"> | ||
| <string>SO:0000110</string> | ||
| </void> | ||
| </object> | ||
| </void> | ||
| </void> | ||
| </object> | ||
| </java> |