Skip to content

Commit

Permalink
cleaning up notebooks
Browse files Browse the repository at this point in the history
  • Loading branch information
@BenUCL
BenUCL committed Aug 30, 2023
1 parent a556ce5 commit 018db3c
Show file tree
Hide file tree
Showing 2 changed files with 0 additions and 561 deletions.
223 changes: 0 additions & 223 deletions code/simclr-pytorch-reefs/evaluation/embeddings/cluster.ipynb
View file
Original file line number Diff line number Diff line change
Expand Up @@ -123,16 +123,6 @@
" print(f\"Locations: {list(locations.keys())}\\n\")"
]
},
{
"cell_type": "code",
"execution_count": 16,
"metadata": {},
"outputs": [],
"source": [
"#specific_df = datasets['ReefCLR']['australia']\n",
"#print(specific_df.head())"
]
},
{
"cell_type": "code",
"execution_count": 17,
Expand Down Expand Up @@ -192,219 +182,6 @@
"results"
]
},
{
"cell_type": "code",
"execution_count": 32,
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>Category</th>\n",
" <th>Location</th>\n",
" <th>Num_Clusters</th>\n",
" <th>Chi2_Stat</th>\n",
" <th>P_Value</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>ImageNet</td>\n",
" <td>australia</td>\n",
" <td>64</td>\n",
" <td>516.445082</td>\n",
" <td>2.032088e-72</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>ImageNet</td>\n",
" <td>bermuda</td>\n",
" <td>10</td>\n",
" <td>789.055342</td>\n",
" <td>3.808284e-131</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>ImageNet</td>\n",
" <td>florida</td>\n",
" <td>53</td>\n",
" <td>2823.698835</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>ImageNet</td>\n",
" <td>french_polynesia</td>\n",
" <td>24</td>\n",
" <td>5760.581385</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>ImageNet</td>\n",
" <td>indonesia</td>\n",
" <td>35</td>\n",
" <td>1453.347837</td>\n",
" <td>7.585708e-284</td>\n",
" </tr>\n",
" <tr>\n",
" <th>5</th>\n",
" <td>ImageNet</td>\n",
" <td>kenya</td>\n",
" <td>10</td>\n",
" <td>18.862426</td>\n",
" <td>2.638840e-02</td>\n",
" </tr>\n",
" <tr>\n",
" <th>6</th>\n",
" <td>ReefCLR</td>\n",
" <td>australia</td>\n",
" <td>61</td>\n",
" <td>254.241849</td>\n",
" <td>9.528436e-26</td>\n",
" </tr>\n",
" <tr>\n",
" <th>7</th>\n",
" <td>ReefCLR</td>\n",
" <td>bermuda</td>\n",
" <td>8</td>\n",
" <td>1307.879670</td>\n",
" <td>8.622588e-247</td>\n",
" </tr>\n",
" <tr>\n",
" <th>8</th>\n",
" <td>ReefCLR</td>\n",
" <td>florida</td>\n",
" <td>48</td>\n",
" <td>2647.520080</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>9</th>\n",
" <td>ReefCLR</td>\n",
" <td>french_polynesia</td>\n",
" <td>31</td>\n",
" <td>5820.833945</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>10</th>\n",
" <td>ReefCLR</td>\n",
" <td>indonesia</td>\n",
" <td>38</td>\n",
" <td>1459.273108</td>\n",
" <td>1.153653e-282</td>\n",
" </tr>\n",
" <tr>\n",
" <th>11</th>\n",
" <td>ReefCLR</td>\n",
" <td>kenya</td>\n",
" <td>27</td>\n",
" <td>290.869245</td>\n",
" <td>1.403893e-46</td>\n",
" </tr>\n",
" <tr>\n",
" <th>12</th>\n",
" <td>VGGish</td>\n",
" <td>australia</td>\n",
" <td>69</td>\n",
" <td>1574.072635</td>\n",
" <td>6.953275e-284</td>\n",
" </tr>\n",
" <tr>\n",
" <th>13</th>\n",
" <td>VGGish</td>\n",
" <td>bermuda</td>\n",
" <td>35</td>\n",
" <td>2439.335422</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>14</th>\n",
" <td>VGGish</td>\n",
" <td>florida</td>\n",
" <td>52</td>\n",
" <td>3568.129860</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>15</th>\n",
" <td>VGGish</td>\n",
" <td>french_polynesia</td>\n",
" <td>34</td>\n",
" <td>7972.709599</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>16</th>\n",
" <td>VGGish</td>\n",
" <td>indonesia</td>\n",
" <td>38</td>\n",
" <td>1970.642248</td>\n",
" <td>0.000000e+00</td>\n",
" </tr>\n",
" <tr>\n",
" <th>17</th>\n",
" <td>VGGish</td>\n",
" <td>kenya</td>\n",
" <td>26</td>\n",
" <td>168.635032</td>\n",
" <td>2.857384e-23</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" Category Location Num_Clusters Chi2_Stat P_Value\n",
"0 ImageNet australia 64 516.445082 2.032088e-72\n",
"1 ImageNet bermuda 10 789.055342 3.808284e-131\n",
"2 ImageNet florida 53 2823.698835 0.000000e+00\n",
"3 ImageNet french_polynesia 24 5760.581385 0.000000e+00\n",
"4 ImageNet indonesia 35 1453.347837 7.585708e-284\n",
"5 ImageNet kenya 10 18.862426 2.638840e-02\n",
"6 ReefCLR australia 61 254.241849 9.528436e-26\n",
"7 ReefCLR bermuda 8 1307.879670 8.622588e-247\n",
"8 ReefCLR florida 48 2647.520080 0.000000e+00\n",
"9 ReefCLR french_polynesia 31 5820.833945 0.000000e+00\n",
"10 ReefCLR indonesia 38 1459.273108 1.153653e-282\n",
"11 ReefCLR kenya 27 290.869245 1.403893e-46\n",
"12 VGGish australia 69 1574.072635 6.953275e-284\n",
"13 VGGish bermuda 35 2439.335422 0.000000e+00\n",
"14 VGGish florida 52 3568.129860 0.000000e+00\n",
"15 VGGish french_polynesia 34 7972.709599 0.000000e+00\n",
"16 VGGish indonesia 38 1970.642248 0.000000e+00\n",
"17 VGGish kenya 26 168.635032 2.857384e-23"
]
},
"execution_count": 32,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"results"
]
},
{
"cell_type": "code",
"execution_count": 37,
Expand Down
Loading

0 comments on commit 018db3c

Please sign in to comment.