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Pull requests: DataBiosphere/azul

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Pull requests list

Fix: Add issue type to existing issues in all repos (#6889) orange [process] Done by the Azul team
#7322 opened Jul 31, 2025 by achave11-ucsc • Draft 100+
2
Promotion 2025-07-29 prod (#7314) backup:gitlab [process] PR requires backing up GitLab instances deploy:gitlab [process] PR requires deploying `gitlab` component deploy:shared [process] PR requires deploying `shared` component no sandbox [process] PR will not be tested in the sandbox orange [process] Done by the Azul team
#7321 opened Jul 30, 2025 by dsotirho-ucsc Loading…
21 of 55 tasks
@dsotirho-ucsc
2
Promotion 2025-07-29 anvilprod (#7314) backup:gitlab [process] PR requires backing up GitLab instances deploy:gitlab [process] PR requires deploying `gitlab` component deploy:shared [process] PR requires deploying `shared` component orange [process] Done by the Azul team
#7320 opened Jul 30, 2025 by dsotirho-ucsc Loading…
21 of 59 tasks
@dsotirho-ucsc
2
Refactor source configuration (partial #7305) orange [process] Done by the Azul team partial [process] PR is does not completely resolve associated ticket upgrade [process] PR includes commit requiring manual upgrade
#7311 opened Jul 25, 2025 by nadove-ucsc • Draft 100+
3
Update to Python 3.13.5 (#6429) 1 review [process] Lead requested changes once deploy:gitlab [process] PR requires deploying `gitlab` component deploy:runner [process] PR requires deploying `runner` component deploy:shared [process] PR requires deploying `shared` component orange [process] Done by the Azul team
#7308 opened Jul 25, 2025 by achave11-ucsc Loading… 100+
11
Configure mirroring per catalog and source (#7066) API API change affecting callers orange [process] Done by the Azul team reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod upgrade [process] PR includes commit requiring manual upgrade
#7304 opened Jul 23, 2025 by nadove-ucsc • Draft 100+
2
Log important SQS message attributes on receipt (#7170) 1 review [process] Lead requested changes once orange [process] Done by the Azul team sandbox [process] Resolution is being verified in sandbox deployment
#7301 opened Jul 23, 2025 by nadove-ucsc Loading… 100+
@dsotirho-ucsc
11
Implement resumable MD5 digests (#7288) orange [process] Done by the Azul team
#7296 opened Jul 22, 2025 by hannes-ucsc Loading… 100+
Fix: CSP: Failure to Define Directive with No Fallback (DataBiosphere/data-browser#4450) orange [process] Done by the Azul team
#7276 opened Jul 15, 2025 by dsotirho-ucsc • Draft 100+
2
Fix: SetAccumulator can exceed its maximum size (#6990) 1 review [process] Lead requested changes once orange [process] Done by the Azul team reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#7274 opened Jul 14, 2025 by dsotirho-ucsc Loading… 100+
25
Fix: Manifest content hash computation times out (#6123) 2 reviews [process] Lead requested changes twice API API change affecting callers orange [process] Done by the Azul team
#7258 opened Jul 8, 2025 by dsotirho-ucsc Loading… 100+
18
Rename files.url to files.azul_file_url for AnVIL (#6549) orange [process] Done by the Azul team partial [process] PR is does not completely resolve associated ticket reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod
#7247 opened Jun 27, 2025 by dsotirho-ucsc • Draft 100+
22
Fix: Cannot generate unfiltered JSONL manifest in AnVIL (#7190) 1 review [process] Lead requested changes once orange [process] Done by the Azul team
#7225 opened Jun 17, 2025 by nadove-ucsc Loading… 100+
@hannes-ucsc
26
Enable mirroring in anvildev and anvilbox (#7154, #7214) 1 review [process] Lead requested changes once orange [process] Done by the Azul team reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod
#7223 opened Jun 16, 2025 by nadove-ucsc Loading… 100+
9
Make GitLab instance CIS level 2 compliant (#5990) orange [process] Done by the Azul team
#6694 opened Nov 8, 2024 by dsotirho-ucsc • Draft 100+
2
Parquet to BigQuery import for GCP-backed AnVIL snapshots (#6355) 0 reviews [process] Lead didn't request any changes iceboxed [process] not planned in the near future orange [process] Done by the Azul team reindex:anvildev [process] PR requires reindexing anvildev reqs [process] PR includes commit requiring ``make requirements``
#6392 opened Jul 10, 2024 by nadove-ucsc Loading… 100+
16
Fix: Race between layer and Lambda update (#5927) 4+ reviews [process] Lead requested changes four times or more orange [process] Done by the Azul team
#6259 opened May 14, 2024 by dsotirho-ucsc Loading… 100+
73
Fix: Can't use curl to download a single manifest in one invocation (#5918) 4+ reviews [process] Lead requested changes four times or more API API change affecting callers orange [process] Done by the Azul team
#6099 opened Mar 26, 2024 by dsotirho-ucsc Loading… 100+
107
ProTip! Updated in the last three days: updated:>2025-07-28.