Workflow file for this run
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| on: | ||
| workflow_call: | ||
| inputs: | ||
| package_name: | ||
| description: 'Name of package, e.g. "alphadia"' | ||
| required: true | ||
| type: string | ||
| build_nodejs_ui: | ||
| description: 'Whether or not an UI needs to be built' | ||
| default: false | ||
| type: boolean | ||
| commit_to_release: | ||
| description: 'Enter commit hash to release (example: ef4037cb571f99cb4919b520fde7174972aae473)' | ||
| type: string | ||
| required: true | ||
| tag_to_release: | ||
| description: 'Enter tag to release (example: v1.5.5)' | ||
| type: string | ||
| required: true | ||
| test_backend: | ||
| description: 'Whether or not the backend should be tested' | ||
| default: false | ||
| type: boolean | ||
| name: Create Draft Release | ||
| jobs: | ||
| Get_New_Version: | ||
| runs-on: ubuntu-latest | ||
| outputs: | ||
| new_version: ${{ steps.check_release_tag.outputs.new_version }} | ||
| steps: | ||
| - name: Checkout code | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| ref: ${{ inputs.commit_to_release }} | ||
| - name: Check release tag | ||
| id: check_release_tag | ||
| shell: bash -le {0} | ||
| run: | | ||
| CURRENT_VERSION=$(grep "__version__" ${{ inputs.package_name }}/__init__.py | cut -f3 -d ' ' | sed 's/"//g') | ||
| if [ "v${CURRENT_VERSION}" != "${{ inputs.tag_to_release }}" ]; then | ||
| echo Code version "v${CURRENT_VERSION}" does not match the tag to release ${{ inputs.tag_to_release }} | ||
| fi | ||
| echo "new_version=$CURRENT_VERSION" >> $GITHUB_OUTPUT | ||
| # exit 1 #TODO add again | ||
| - uses: mukunku/[email protected] | ||
| id: check-tag | ||
| with: | ||
| tag: ${{ inputs.tag_to_release }} | ||
| - name: Check if tag already exists | ||
| run: | | ||
| echo "Tag already exists!" | ||
| exit 1 | ||
| if: steps.check-tag.outputs.exists == 'true' | ||
| Create_Draft_Release: | ||
| runs-on: ubuntu-latest | ||
| needs: Get_New_Version | ||
| outputs: | ||
| upload_url: ${{ steps.draft_release.outputs.upload_url }} | ||
| steps: | ||
| - name: Draft Release | ||
| id: draft_release | ||
| # TODO this action is deprecated, replace with https://github.com/ncipollo/release-action | ||
| # cf. https://github.com/actions/create-release/issues/119#issuecomment-783010321 | ||
| uses: actions/create-release@v1 | ||
| env: | ||
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
| with: | ||
| tag_name: ${{ inputs.tag_to_release }} | ||
| release_name: ${{ inputs.tag_to_release }} | ||
| draft: true | ||
| prerelease: false | ||
| Create_MacOS_Installer: | ||
| needs: [Create_Draft_Release, Get_New_Version] | ||
| env: | ||
| ARCH: x64 | ||
| EAGER_IMPORT: true | ||
| runs-on: macos-latest-xlarge | ||
| steps: | ||
| - name : Checkout code | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| ref: ${{ inputs.commit_to_release }} | ||
| # Build backend | ||
| - name: Install conda | ||
| uses: conda-incubator/setup-miniconda@v3 | ||
| with: | ||
| miniconda-version: "latest" | ||
| auto-update-conda: true | ||
| activate-environment: alphax_release | ||
| python-version: "3.11" # TODO | ||
| - name: Print architecture | ||
| shell: bash -el {0} | ||
| run: | | ||
| python -c "import platform; print(platform.machine())" | ||
| - name: Build backend | ||
| shell: bash -el {0} | ||
| run: | | ||
| release/macos/build_backend_macos.sh | ||
| ls * | ||
| - name: Test backend | ||
| if: ${{ inputs.test_backend }} | ||
| shell: bash -el {0} | ||
| run: | | ||
| EXECUTABLE=dist/${{ inputs.package_name }}/${{ inputs.package_name }} | ||
| echo testing ${EXECUTABLE} .. | ||
| eval ${EXECUTABLE} --version | ||
| # Build GUI | ||
| - name: Setup Node.js | ||
| if: ${{ inputs.build_nodejs_ui }} | ||
| uses: actions/setup-node@v4 | ||
| - name: Build GUI | ||
| if: ${{ inputs.build_nodejs_ui }} | ||
| run: | | ||
| release/macos/build_gui_macos.sh | ||
| ls * | ||
| # combine backend and GUI | ||
| - name: Build package | ||
| shell: bash -el {0} | ||
| run: | | ||
| release/macos/build_pkg_macos.sh | ||
| ls * | ||
| - name: Test installer | ||
| shell: bash -l {0} | ||
| run: | | ||
| sudo installer -pkg dist/${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-darwin-${{ env.ARCH }}.pkg -target / | ||
| - name: List output files | ||
| run: | | ||
| ls dist | ||
| # Upload the package | ||
| - name: Upload a Release Asset | ||
| uses: actions/upload-release-asset@v1 | ||
| env: | ||
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
| with: | ||
| upload_url: ${{ needs.Create_Draft_Release.outputs.upload_url }} | ||
| # ALPHADIA | ||
| asset_path: dist/${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-darwin-${{ env.ARCH }}.pkg | ||
| asset_name: ${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-darwin-${{ env.ARCH }}.pkg | ||
| asset_content_type: application/zip | ||
| Create_Windows_Installer: | ||
| needs: [Create_Draft_Release, Get_New_Version] | ||
| env: | ||
| ARCH: x64 | ||
| runs-on: windows-latest | ||
| steps: | ||
| - name : Checkout code | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| ref: ${{ inputs.commit_to_release }} | ||
| # Build backend | ||
| - name: Install conda | ||
| uses: conda-incubator/setup-miniconda@v3 | ||
| with: | ||
| miniconda-version: "latest" | ||
| auto-update-conda: true | ||
| activate-environment: alpha | ||
| python-version: "3.11" | ||
| - name: Build Backend | ||
| shell: powershell | ||
| run: | | ||
| release/windows/build_backend.ps1 | ||
| ls * | ||
| - name: Test Backend | ||
| if: ${{ inputs.test_backend }} | ||
| shell: powershell | ||
| run: | | ||
| dist\${{ inputs.package_name }}\${{ inputs.package_name }}.exe --version | ||
| # Build GUI | ||
| - name: Setup Node.js | ||
| if: ${{ inputs.build_nodejs_ui }} | ||
| uses: actions/setup-node@v4 | ||
| - name: Build GUI | ||
| if: ${{ inputs.build_nodejs_ui }} | ||
| shell: powershell | ||
| run: | | ||
| release/windows/build_gui.ps1 | ||
| # combine backend and GUI | ||
| - name: Check if Innosetup is installed | ||
| if: ${{ inputs.build_nodejs_ui }} | ||
| shell: powershell | ||
| run: | | ||
| if (-not (Test-Path "C:\Program Files (x86)\Inno Setup 6\ISCC.exe")) { | ||
| Write-Host "Inno Setup is not installed" | ||
| exit 1 | ||
| } | ||
| else { | ||
| Write-Host "Inno Setup is installed" | ||
| } | ||
| - name: Build Installer | ||
| shell: powershell | ||
| run: | | ||
| release/windows/build_installer.ps1 | ||
| - name: List output files | ||
| run: | | ||
| ls dist | ||
| - name: Upload a Release Asset | ||
| uses: actions/upload-release-asset@v1 | ||
| env: | ||
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
| with: | ||
| upload_url: ${{ needs.Create_Draft_Release.outputs.upload_url }} | ||
| asset_path: dist/${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-win-${{ env.ARCH }}.exe | ||
| asset_name: ${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-win-${{ env.ARCH }}.exe | ||
| asset_content_type: application/zip | ||
| - name: Build Backend | ||
| shell: bash -l {0} # TODO 'CPU' parameter | ||
| run: | | ||
| release/linux/build_backend_linux.sh CPU | ||
| - name: Build Installer | ||
| shell: bash -l {0} | ||
| run: | | ||
| release/linux/build_installer_linux.sh | ||
| - name: Test installer for Linux | ||
| continue-on-error: true # TODO remove | ||
| shell: bash -l {0} | ||
| run: | | ||
| sudo dpkg -i dist/${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-darwin-${{ env.ARCH }}.deb | ||
| - name: Upload Linux Installer | ||
| id: upload-release-asset | ||
| uses: actions/upload-release-asset@v1 | ||
| env: | ||
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | ||
| with: | ||
| upload_url: ${{ needs.Create_Draft_Release.outputs.upload_url }} | ||
| asset_path: dist/${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-darwin-${{ env.ARCH }}.deb | ||
| asset_name: ${{ inputs.package_name }}-${{ needs.Get_New_Version.outputs.new_version }}-darwin-${{ env.ARCH }}.deb | ||
| asset_content_type: application/zip | ||
| # upload_url: ${{ needs.Create_Draft_On_GitHub.outputs.upload_url }} | ||
| # asset_path: release/one_click_linux_gui/dist/peptdeep_gui_installer_linux.deb | ||
| # asset_name: peptdeep_gui_installer_linux.deb | ||
| # asset_content_type: application/octet-stream | ||
| # | ||
