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@NNeuralDynamics

Neural Dynamics

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  1. eCLIP-ENCODE-GRCH38 eCLIP-ENCODE-GRCH38 Public

    ENCODE eCLIP data preprocessing

    Jupyter Notebook 1

  2. high-precision-regressors high-precision-regressors Public

    Forked from talismanbrandi/high-precision-ml

    Jupyter Notebook 1

  3. equivariant-diffusion equivariant-diffusion Public

    Building equivariance into neural network diffusion

  4. differential-isoform-salmon differential-isoform-salmon Public

    repository for differential isoform usage analysis using salmon

    C++

  5. SpliSER SpliSER Public

    Forked from CraigIDent/SpliSER

    Bioinformatic tool for Splice site Strength Estimation using RNA-seq

    Python

  6. nuclear-binding-energies nuclear-binding-energies Public

    A repository for machine learning nuclear binding energies

Repositories

Showing 10 of 17 repositories
  • NNeuralDynamics/ml-models-splicing’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 29, 2025
  • SpliceAI-variant-effect-prediction Public

    SpliceAI wrapper for retraining SpliceAI and variant effect prediction

    NNeuralDynamics/SpliceAI-variant-effect-prediction’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Mar 29, 2025
  • SpliSER Public Forked from CraigIDent/SpliSER

    Bioinformatic tool for Splice site Strength Estimation using RNA-seq

    NNeuralDynamics/SpliSER’s past year of commit activity
    Python 0 6 0 0 Updated Mar 29, 2025
  • Pangolin Public Forked from tkzeng/Pangolin

    Pangolin is a deep-learning method for predicting splice site strengths.

    NNeuralDynamics/Pangolin’s past year of commit activity
    Python 0 GPL-3.0 36 0 0 Updated Mar 28, 2025
  • nucleotide-transformer Public Forked from instadeepai/nucleotide-transformer

    🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

    NNeuralDynamics/nucleotide-transformer’s past year of commit activity
    Python 0 68 0 0 Updated Mar 28, 2025
  • RiNALMo Public Forked from lbcb-sci/RiNALMo

    RiboNucleic Acid (RNA) Language Model

    NNeuralDynamics/RiNALMo’s past year of commit activity
    Python 0 Apache-2.0 17 0 0 Updated Mar 28, 2025
  • hyena-dna Public Forked from HazyResearch/hyena-dna

    Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

    NNeuralDynamics/hyena-dna’s past year of commit activity
    Assembly 0 Apache-2.0 94 0 0 Updated Mar 28, 2025
  • SpliceTransformer Public Forked from ShenLab-Genomics/SpliceTransformer

    SpliceTransformer(SpTransformer) is a deep learning tool to predict tissue specific splicing site from pre-mRNA sequence

    NNeuralDynamics/SpliceTransformer’s past year of commit activity
    Python 0 Apache-2.0 5 0 0 Updated Mar 28, 2025
  • equivariant-diffusion Public

    Building equivariance into neural network diffusion

    NNeuralDynamics/equivariant-diffusion’s past year of commit activity
    0 MIT 0 0 0 Updated Mar 27, 2025
  • eCLIP-ENCODE-GRCH38 Public

    ENCODE eCLIP data preprocessing

    NNeuralDynamics/eCLIP-ENCODE-GRCH38’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Mar 25, 2025

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