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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 946 458

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 236 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 282 141

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 33

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 85 62

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    R 191 90

Repositories

Showing 10 of 325 repositories
  • d2e Public

    Data2Evidence is an end-to-end solution for management of OMOP data - https://data2evidence.org

    OHDSI/d2e’s past year of commit activity
    TypeScript 15 Apache-2.0 0 0 12 Updated Apr 22, 2025
  • FeatureExtraction Public

    An R package for generating features (covariates) for a cohort using data in the Common Data Model.

    OHDSI/FeatureExtraction’s past year of commit activity
    R 62 61 44 (1 issue needs help) 6 Updated Apr 22, 2025
  • LlmPrompts Public

    [under development] out of the box prompts to use large language models

    OHDSI/LlmPrompts’s past year of commit activity
    0 Apache-2.0 0 0 0 Updated Apr 22, 2025
  • dbt-synthea Public

    [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM

    OHDSI/dbt-synthea’s past year of commit activity
    Python 25 Apache-2.0 8 15 1 Updated Apr 22, 2025
  • OHDSI/CohortConstructor’s past year of commit activity
    R 2 Apache-2.0 0 43 4 Updated Apr 21, 2025
  • WebAPI Public

    OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

    OHDSI/WebAPI’s past year of commit activity
    Java 137 Apache-2.0 171 124 (1 issue needs help) 18 Updated Apr 21, 2025
  • Polites Public

    Polites OHDSI Automation Tools

    OHDSI/Polites’s past year of commit activity
    Java 0 Apache-2.0 0 4 0 Updated Apr 21, 2025
  • Ares Public

    A Research Exploration System

    OHDSI/Ares’s past year of commit activity
    Vue 13 Apache-2.0 7 42 2 Updated Apr 21, 2025
  • ShinyProxyDeploy Public

    Deploy OHDSI Shiny apps to results.ohdsi.org

    OHDSI/ShinyProxyDeploy’s past year of commit activity
    0 3 0 0 Updated Apr 19, 2025
  • OHDSI/OhdsiExampleStudyApp’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Apr 19, 2025

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