1 Release published by 1 person

• v3.0.1

  published Mar 3, 2025

7 Issues closed by 3 people

• SNV output VCF missing?

  #159 closed Mar 6, 2025

• BLAZE FASTQs through wf-single-cell

  #153 closed Mar 3, 2025

• umi_gene_saturation error 137

  #142 closed Mar 3, 2025

• All cells filtered out when using bam as input

  #146 closed Mar 3, 2025

• 5prime v3

  #116 closed Mar 3, 2025

• No such file or directory: 'bc_longlist_dir/3M-february-2018.txt.gz'

  #148 closed Mar 3, 2025

• Double adapter1 meaning

  #147 closed Mar 3, 2025

4 Unresolved conversations

Sometimes conversations happen on old items that aren’t yet closed. Here is a list of all the Issues and Pull Requests with unresolved conversations.

• Matrix generation steps not running on the workflow

  #157 commented on Mar 3, 2025 • 0 new comments

• Experience/advice with changing the barcode_max_ed / barcode_min_ed_diff to increase number of tagged reads

  #155 commented on Mar 3, 2025 • 0 new comments

• Pipeline fails with "Cannot open file x.tsv for writing. Too many open files"

  #158 commented on Mar 5, 2025 • 0 new comments

• Python/minimap2 not found when running v2.3.0 using Singularity on demo data

  #144 commented on Mar 7, 2025 • 0 new comments