feat: updated version of pretext workflow developed by Delphine that takes HiFi and HiC as input.#584

Open

Smeds wants to merge 32 commits intogalaxyproject:mainfrom Smeds:update-pretext

+2,863

Commits on Oct 30, 2024

feat: updated version of pretext workflow developed by Delphine that takes HiFi and HiC as input.
Smeds
committed

Commits on Nov 5, 2024

Fix connections between optional parameters and mandatory inputs,...
Delphine-L
authored

Commits on Nov 12, 2024

Commits on Nov 14, 2024

update pretextgraph to fix track display issue, and add parameters to go around the fasta implicit conversion problem
Delphine-L
committed
add new parameter to the README
Delphine-L
committed

Commits on Dec 13, 2024

update tools
Delphine-L
committed

Commits on Feb 4, 2025

make hap2 optionnal, correct input names in test
Delphine-L
committed

Commits on Feb 12, 2025

replace filter and merge by bwamem2 sp option and use smaller data for testing
Delphine-L
committed

Commits on Feb 14, 2025