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@kusterlab

Kuster Lab

The Kuster Lab comprises an international research team with a focus on proteomics, chemical biology and biomarker discovery

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  1. prosit prosit Public archive

    Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019"…

    Python 85 45

  2. SIMSI-Transfer SIMSI-Transfer Public

    Similarity-based Isobaric MS2 Identification Transfer

    Python 2 3

Repositories

Showing 10 of 28 repositories
  • topas-portal Public

    Exploratory web-based tool for clinical proteomics TOPAS platform

    kusterlab/topas-portal’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Mar 19, 2025
  • topas-pipeline Public

    Automated (phospho)proteomics processing pipeline for large patient cohorts providing cohort as well as patient-specific insights.

    kusterlab/topas-pipeline’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Mar 18, 2025
  • curve_curator Public

    Analysis platform for large-scale dose-dependent data

    kusterlab/curve_curator’s past year of commit activity
    Python 23 Apache-2.0 3 5 0 Updated Mar 13, 2025
  • SIMSI-Transfer Public

    Similarity-based Isobaric MS2 Identification Transfer

    kusterlab/SIMSI-Transfer’s past year of commit activity
    Python 2 Apache-2.0 3 7 0 Updated Mar 13, 2025
  • picked_group_fdr Public

    Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments

    kusterlab/picked_group_fdr’s past year of commit activity
    Jupyter Notebook 11 Apache-2.0 5 7 0 Updated Mar 13, 2025
  • psite_annotation Public

    Python module for annotating a pandas dataframe with phosphosites, e.g. PhosphoSitePlus annotations, kinase-substrate relations, domain information, etc.

    kusterlab/psite_annotation’s past year of commit activity
    Python 4 Apache-2.0 0 2 0 Updated Feb 26, 2025
  • ProSIMSIt Public
    kusterlab/ProSIMSIt’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Feb 26, 2025
  • enrichment-server Public
    kusterlab/enrichment-server’s past year of commit activity
    HTML 0 Apache-2.0 0 0 0 Updated Feb 19, 2025
  • biowc-pathwaygraph Public

    Interactive Visualization of Signaling Pathways

    kusterlab/biowc-pathwaygraph’s past year of commit activity
    TypeScript 2 Apache-2.0 0 0 0 Updated Feb 19, 2025
  • pathway-importer Public

    Download and Convert Pathways from KEGG and WikiPathways

    kusterlab/pathway-importer’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Nov 27, 2024
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