Make symlinks for python-ihm's util subdirectory #876
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name: CI | |
on: [push, pull_request] | |
env: | |
CXXFLAGS: "-fprofile-arcs -ftest-coverage" | |
jobs: | |
test: | |
name: "Python ${{ matrix.python-version }} / ${{ matrix.os }}" | |
runs-on: ${{ matrix.os }} | |
strategy: | |
matrix: | |
python-version: ["3.10"] | |
os: [ubuntu-22.04] | |
compiler: [gcc] | |
env: | |
CC: ${{ matrix.compiler }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Install dependencies | |
run: | | |
sudo apt-get update -qq | |
sudo apt-get install -qq libboost-all-dev swig libhdf5-dev libeigen3-dev \ | |
cmake libcgal-dev libcgal-qt5-dev libcereal-dev \ | |
libfftw3-dev libopencv-dev libgsl-dev libann-dev \ | |
libprotobuf-dev protobuf-compiler \ | |
libopenmpi-dev python3-dev python3-numpy python3-protobuf \ | |
python3-nose python3-pip python3-biopython | |
pip3 install codecov | |
- name: Set up git | |
run: ./setup_git.py | |
- name: Build IMP | |
run: | | |
mkdir build | |
cd build | |
cmake .. -DUSE_PYTHON2=OFF -DCMAKE_CXX_FLAGS="${{ env.CXXFLAGS }}" -DCGAL_DIR=/usr/lib/x86_64-linux-gnu/cmake/CGAL/ | |
make -k -j 2 |