Mixed models @lme4 + custom covariances + parameter constraints
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Jan 7, 2021 - R
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relatedness
Here are 28 public repositories matching this topic...
RDT: Russian Distributional Thesaurus (Русский Дистрибутивный Тезаурус)
nlp semantic natural-language-processing word2vec thesaurus trie similarity russian marisa-trie similarity-measures distributional-semantics distributional-analysis distributional semantic-relations relatedness
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Feb 28, 2019 - Python
An online pedigree tool for research applications. Build pedigrees interactively and store as images or text files in ped format. QuickPed also computes a variety of relatedness coefficients and offers verbal descriptions of pairwise relationships.
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May 10, 2024 - R
SemEval 2024 Task 1 : Textual Semantic Relatedness
semantic semantic-similarity shared semeval relatedness shared-task semeval-2024 semantic-textual-relatedness
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Jun 22, 2024 - Jupyter Notebook
An integrated pipeline for analysis and visualization of Population Structure and Relatedness based on genome-wide genetic variant data
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Apr 6, 2023 - R
Computation of pedigree-based relatedness coefficients. Part of the ped suite packages for pedigree analysis in R
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Dec 6, 2024 - R
Retrofitting Concept Vectors
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Sep 6, 2017 - SystemVerilog
Simulate patterns of DNA sharing between pedigree members
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Sep 8, 2024 - R
Program for positive genetic identification and IBD detection from low-coverage sequencing data
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Sep 4, 2024 - C
Compares large numbers of bacterial sequences
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Jun 1, 2018 - Python
SoftSVM implementation
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Sep 24, 2018 - Jupyter Notebook
An ancient DNA genetic relatedness estimation software relying on pedigree simulations
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Nov 29, 2024 - Rust
Bacterial relatedness server, supporting sequence clustering & mixture detection
rest-server clustering-algorithm rest-client relatedness bacterial-genomes single-nucleotide-variation mixed-infection
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Nov 23, 2021 - Python
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Nov 17, 2018 - Jupyter Notebook
A legacy version of the ibdsim2 app for simulating and visualising genetic sharing between pedigree members.
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Aug 5, 2024 - R
Source material for "Relatedness, Complexity and Local Growth"
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Jul 20, 2020 - R
Pedigree program that allows the individuals to have multiple fathers.
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Oct 20, 2023 - C#
grups.plots is a companion R package to grups-rs, providing with a Shiny dashboard, harboring multiple interactive visualizations, utilities and summary statistics to analyse its results
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Dec 15, 2023 - R
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