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Pull requests: galaxyproject/galaxy

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Pull requests list

Merge Release 24.2 into dev area/UI-UX area/util merge
#19443 opened Jan 21, 2025 by ahmedhamidawan Loading…
1 of 4 tasks
25.0
Type annotations improvements area/API area/testing area/tool-framework kind/enhancement kind/refactoring cleanup or refactoring of existing code, no functional changes
#19442 opened Jan 21, 2025 by nsoranzo Loading…
2 of 4 tasks
25.0
1
Add user defined YAML tools area/API area/client area/database Galaxy's database or data access layer area/jobs area/testing/api area/testing area/tool-dependencies area/tool-framework area/workflows
#19434 opened Jan 21, 2025 by mvdbeek • Draft
1 of 4 tasks
Document $__user_name__ area/tool-framework
#19433 opened Jan 21, 2025 by bernt-matthias Loading…
1 of 4 tasks
25.0
1
Add IGB display support for CRAM files area/datatypes
#19428 opened Jan 21, 2025 by paige-kulzer Loading…
2 of 4 tasks
25.0
[24.2] Fix job parameter summary for inputs without label area/jobs area/UI-UX kind/bug
#19427 opened Jan 21, 2025 by mvdbeek Loading…
1 of 4 tasks
25.0
mulled: also consider non strict channel priority area/tool-dependencies area/tool-framework
#19425 opened Jan 21, 2025 by bernt-matthias Loading…
1 of 4 tasks
25.0
2
[WIP] SQLAlchemy 2.0 follow-up: misc. improvements area/database Galaxy's database or data access layer kind/refactoring cleanup or refactoring of existing code, no functional changes
#19417 opened Jan 17, 2025 by jdavcs • Draft
1 of 4 tasks
25.0
1
[24.1] add MuData as subclass of H5 area/datatypes
#19416 opened Jan 17, 2025 by pavanvidem Loading…
1 task done
24.1
Irods objectstore templates area/objectstore
#19415 opened Jan 17, 2025 by pauldg Loading…
2 of 4 tasks
25.0
Prevent users from reusing a banned email after account is purged area/admin highlight/admin Included in admin/dev release notes kind/feature
#19413 opened Jan 17, 2025 by jdavcs Loading…
3 of 4 tasks
25.0
7
avoid using custos refresh tokens which are expired area/auth Authentication and authorization area/backend kind/bug
#19411 opened Jan 16, 2025 by martenson Loading…
2 of 4 tasks
25.0
Remove transaction helper area/database Galaxy's database or data access layer area/testing kind/refactoring cleanup or refactoring of existing code, no functional changes
#19407 opened Jan 14, 2025 by jdavcs Loading…
2 of 4 tasks
25.0
1
Gulp build improvements, update. area/client
#19405 opened Jan 14, 2025 by dannon Loading…
1 of 4 tasks
25.0
1
[24.2] Show message for mixed extensions in collection creator area/dataset-collections area/UI-UX kind/bug
#19404 opened Jan 13, 2025 by ahmedhamidawan • Draft
1 of 4 tasks
Change galaxy system user uid for K8s image area/deployment kind/refactoring cleanup or refactoring of existing code, no functional changes
#19403 opened Jan 13, 2025 by afgane Loading…
2 of 4 tasks
25.0
Refactor of User-Reported Dataset Error Emails area/UI-UX
#19401 opened Jan 13, 2025 by hujambo-dunia Loading…
2 of 4 tasks
25.0
1
Alternative format_source fix area/jobs kind/bug
#19395 opened Jan 10, 2025 by mvdbeek Loading…
1 of 4 tasks
25.0
1
Better handling of public pages and workflows authored by deleted users area/pages area/UI-UX area/workflows kind/bug
#19394 opened Jan 10, 2025 by jdavcs Loading…
6 of 8 tasks
25.0
4
Merge latest 24.2 into dev. area/testing area/tool-framework area/UI-UX kind/bug merge
#19392 opened Jan 9, 2025 by jmchilton Loading…
2 tasks done
Documentation around highlighting PRs for release notes. area/documentation kind/enhancement
#19390 opened Jan 9, 2025 by jmchilton Loading…
1 task done
25.0
2
clarify that extra_scopes is sometimes non-optional area/documentation kind/enhancement
#19385 opened Jan 8, 2025 by martenson Loading…
1 task done
25.0
1
Empower Users to Build More Kinds of Collections, More Intelligently area/API area/dataset-collections area/tool-framework area/UI-UX highlight Included in user-facing release notes at the top kind/feature
#19377 opened Jan 6, 2025 by jmchilton • Draft
3 tasks done
6
Add Dataverse RDM repository integration area/tool-framework area/UI-UX
#19367 opened Dec 21, 2024 by KaiOnGitHub Loading…
2 tasks done
25.0
[24.1] Determine expression tool output extension when input terminal area/jobs area/workflows kind/bug
#19364 opened Dec 20, 2024 by mvdbeek • Draft
2 of 4 tasks
7
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